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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015953723.1_cds_XP_016492768.1_82948
CDS Infomation

[gene=LOC107812233] [db_xref=GeneID:107812233] [protein=LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.1 isoform X1] [protein_id=XP_016492768.1] [location=complement(join(43480..44447,44744..45001,45328..45357,45453..46305))] [gbkey=CDS]
Sequence

ATGCAAAATCCTACAGCCAAGCAAAAACAAACAATAAAAGAAATTCTAAAAACTTCAGAT
TTTGTTACAACATTCTTGGATATTCTTGTTAATGTTGTTGTTGTTGATATTCTTTTCTTT
TTTATCCAAAAAGGGTATATCATGGATTTATTTTCTTGGTTTTTTATTTCCATTTTCATT
CATTTTTGGTGCTTTAATTCAGCTCAAGGACAGAACACATCCTCCTCAAGTTGCACTAAA
GAATTCCAGTGTGGAAGTCTAGGAAATTTGAGCTTTCCTTTCTACAAATCCACTCAACTT
GATTGTGGTTTGTGCAAAGTGGATTGTGAAGTTACTCCAAATCCCATAATTGAATTAGAA
GGGGTGAAATATCAAGCTCTTGAGAAACATGATGTTTTTATCAAACTTAAGGATTTTACT
CTTGAACACTTCTTGAAGAACAAGAGTTGCCAATCTTTTGATAGAAATCTGTCTTTACCA
ATTTCTCCTTCAATAACATATAGAGTCAACCCCTTTCTCACTTTGTTCAAATGCAATAAT
AGCCAGAAGATACATGAAGATGTTTTCAAGTCCACAAGTTATCAAAGTTACAATAGCTGT
GAAAGTTTCATATTATACTATAGCCAAACAATCAATTATTTTCAAGGTTTTCATCTTCCT
ACTGGCTGTTCATTCGTTCAGTTGCCCAAGTCGTCGAGTTCAGAAGCTGAATCAAATGAC
TTATTTGATCTGTTAACTGATGAAGTTACACTAGGATGGACTGTGTCTGATGAATGTAAT
CAGTGTTATTATAGAGGAGGGAAGTGTCAAACTGATAATACTACTAAAACATTTCTTTGT
TATAATACCAAAGGAAATACAAAAGTGAAAGTGATTGTTGCAGTTTCAGCATTTATTGGT
TTACTTTTTGGACTCTGCACAATTGCCTCTGTTATATGGTTTTGCAAGAGGAGGAAAAAT
GATTCTTCACCATTTCTTTCAAGAAATACATCTGGTGCTTCAATGCTTCATCAAGATCTC
GAGGAACATAGCCAATATCTAGGAATCCCAGTATTCACCTACAGAGAACTTGAAGAAGCC
ACCAACAAATTCAACTCTGCTAAACAACTTGGTGATGGAGGTTATGGAACTGTGTACTAT
GGGAAACTTAGAGATGGAAAAGAAGTTGCAGTTAAGCGCCTTTATGAGCACAATCACAAG
CAAATGCAGCAATTCATCAATGAAATTGAAATTCTTACTCGCCTTAGGCATCGGAATCTT
GTTATCCTTTATGGATGTACATCAAGACGTAGCCGTGAACTCTTCCTTGTTTATGAGTAC
ATTCCCAATGGAACAATTGCTGATCACCTGCACGGACATAGAGCAAAGGATAAGTTACTT
ACATGGCCTATACGGCTCAAAATCGCCATAGAAATTGCTAGTGCATTGGCTTACCTTCAT
GCTTCTGACATCATACACCGCGATGTCAAGACTAATAACATTCTCCTGGACAATGACTTT
TGTGTCAAAGTAGCAGATTTCGGGCTGTCAAAACTCTTCCCTAATGATGTTACTCATATC
TCAACTGCACCACAGGGGACCCCGGGATATGTTGATCCTCAATATCATGAATGTTACCAG
CTTACCGATAAGAGTGATGTTTATAGCTTCGGGGTTGTCCTTGTCGAGCTCATATCATCA
ATGCCTGCTGTGGATATGAATAGACATATGCACGAGATTAACTTGGCTAGCTTCGCGATG
AACAGGATATTGAAGTGCGCGTTTAATGAGGTGATCGATCCAGCTCTTGGATTCGAGACA
AATGCTGAAGTTAGGAGGATGACAACATCAGTTGCAGAACTAGCTTTTCAGTGCTTGCAA
GCTGTGAAGGACATGAGGCCTAAAATGGAAGAAGTACTCGAGACGTTGAAGACTATTAAA
GAAGGTGAATGGAAAAATTATCACAGAAAGGAGATCAGTGGTAAATGTACTGAGCTTAGA
AGGGTAAAAGCGCATCATCCTTCTGAAACGGAGGATGCTGTGTTATTGAAGAAAAATATT
CCAGCTTCACCTGATACTGTGATTGATACATGGGCTAGTAGCTCCACCACTACTAGTACT
GGAGGTTGA

Peptide Sequence

PEP ID

XP_016492768.1
PEP Infomation

PREDICTED: LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.1 isoform X1 [Nicotiana tabacum]
Sequence

MQNPTAKQKQTIKEILKTSDFVTTFLDILVNVVVVDILFFFIQKGYIMDLFSWFFISIFI
HFWCFNSAQGQNTSSSSCTKEFQCGSLGNLSFPFYKSTQLDCGLCKVDCEVTPNPIIELE
GVKYQALEKHDVFIKLKDFTLEHFLKNKSCQSFDRNLSLPISPSITYRVNPFLTLFKCNN
SQKIHEDVFKSTSYQSYNSCESFILYYSQTINYFQGFHLPTGCSFVQLPKSSSSEAESND
LFDLLTDEVTLGWTVSDECNQCYYRGGKCQTDNTTKTFLCYNTKGNTKVKVIVAVSAFIG
LLFGLCTIASVIWFCKRRKNDSSPFLSRNTSGASMLHQDLEEHSQYLGIPVFTYRELEEA
TNKFNSAKQLGDGGYGTVYYGKLRDGKEVAVKRLYEHNHKQMQQFINEIEILTRLRHRNL
VILYGCTSRRSRELFLVYEYIPNGTIADHLHGHRAKDKLLTWPIRLKIAIEIASALAYLH
ASDIIHRDVKTNNILLDNDFCVKVADFGLSKLFPNDVTHISTAPQGTPGYVDPQYHECYQ
LTDKSDVYSFGVVLVELISSMPAVDMNRHMHEINLASFAMNRILKCAFNEVIDPALGFET
NAEVRRMTTSVAELAFQCLQAVKDMRPKMEEVLETLKTIKEGEWKNYHRKEISGKCTELR
RVKAHHPSETEDAVLLKKNIPASPDTVIDTWASSSTTTSTGG

Transcript Sequence

Gene sequence data has not been registered.